Dataset:
- breast cancer
- proteomics by mass spectrometry
Goal:
Explore the dataset for patterns
Create models to identify the breast cancer subclasses
10 May, 2020
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Introduction
Materials and Methods
Dataset:
Materials and Methods:
*Exploratory data analysis of clinical data
PCA
K-means
ANN
No definitive effects between expression landscapes and specific tumor subclasses
Breast cancer subtypes in the dataset are well represented
Breast cancer subtypes do not discriminate
Breast cancer & Gender
Dimentionality reduction
PCA analysis
K-means clustering
ANN model’s representation
ANN representation
Current “file” state
Discussion
What could have been better
further work
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